ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000050132 Sarm1 10090 - 11:78472330-78497754 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000061174 Sarm1-001 78473291-78497754 protein_coding
  ENSMUST00000108287 Sarm1-002 78472330-78497458 protein_coding
  ENSMUST00000130955 Sarm1-004 78490955-78497686 processed_transcript
  ENSMUST00000153534 Sarm1-003 78473213-78483798 retained_intron
  ENSMUST00000170674 Sarm1-005 78482834-78487295 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000061174ENSMUST00000108287ENSMUST00000153534
Transcript ID C166 Tie2+ EC mES
ENSMUST00000061174 0.084±0.03 0.030±0.00 0.025±0.00
ENSMUST00000108287 N/A 0.012±0.01 0.036±0.00
ENSMUST00000153534 0.064±0.03 0.136±0.00 0.136±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003LU CIL_0003LU_0002 CGP
CIL_0000FM CIL_0000FM_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005874 IDA microtubule
GO:0007165 IEA signal transduction
GO:0009749 IMP response to glucose
GO:0015630 IDA microtubule cytoskeleton
GO:0030054 IEA cell junction
GO:0030425 IMP dendrite
GO:0031315 IDA extrinsic component of mitochondrial outer membrane
GO:0042981 IMP regulation of apoptotic process
GO:0045087 IEA innate immune response
GO:0045202 IDA synapse
GO:0048814 IMP regulation of dendrite morphogenesis
GO:1901214 IMP regulation of neuron death

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010610 sarm1 protein_coding Danio_rerio
ENSG00000004139 SARM1 sterile alpha and TIR motif containing 1 protein_coding Homo_sapiens

Loading