ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000050751 Pgbd5 10090 - 8:124369049-124439658 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000052580 Pgbd5-201 124369049-124433936 protein_coding
  ENSMUST00000128312 Pgbd5-004 124371869-124375546 processed_transcript
  ENSMUST00000136892 Pgbd5-002 124370023-124393216 protein_coding
  ENSMUST00000140012 Pgbd5-001 124369053-124434338 protein_coding
  ENSMUST00000140126 Pgbd5-005 124371885-124375111 retained_intron
  ENSMUST00000172566 Pgbd5-003 124369049-124439658 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000052580ENSMUST00000136892ENSMUST00000140012
Transcript ID C166 Tie2+ EC mES
ENSMUST00000052580 0.028±0.01 0.363±0.00 N/A
ENSMUST00000136892 0.027±0.01 0.173±0.03 0.113±0.02
ENSMUST00000140012 0.040±0.00 N/A 0.223±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008A0 CIL_0008A0_0002 VISTA
CIL_000612 CIL_000612_0002 CGP
CIL_0007WK CIL_0007WK_0002 VISTA
CIL_00060Z CIL_00060Z_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011042 pgbd5 protein_coding Danio_rerio
ENSG00000177614 PGBD5 piggyBac transposable element derived 5 protein_coding Homo_sapiens

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