ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051355 Commd1 10090 - 11:22896136-22982382 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000057843 Commd1-001 22899764-22978996 protein_coding
  ENSMUST00000071068 Commd1-005 22899759-22982252 protein_coding
  ENSMUST00000093270 Commd1-002 22956152-22982184 protein_coding
  ENSMUST00000159081 Commd1-003 22896136-22982382 protein_coding
  ENSMUST00000161944 Commd1-007 22899835-22956947 retained_intron
  ENSMUST00000162924 Commd1-006 22900023-22972859 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; Tie2+ ECmESENSMUST00000071068ENSMUST00000093270ENSMUST00000159081
Transcript ID Tie2+ EC mES
ENSMUST00000071068 85.893±0.00 76.979±22.97
ENSMUST00000093270 N/A 50.304±4.87
ENSMUST00000159081 8.087±0.00 3.396±0.66

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003BY CIL_0003BY_0002 CGP
CIL_0004OO CIL_0004OO_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005507 ISS copper ion binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006878 ISA cellular copper ion homeostasis
GO:0031398 ISS positive regulation of protein ubiquitination
GO:0031462 ISS Cul2-RING ubiquitin ligase complex
GO:0032088 ISO negative regulation of NF-kappaB transcription factor activity
GO:0032434 ISS regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0055070 ISS copper ion homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031203 commd1 protein_coding Danio_rerio
ENSG00000173163 COMMD1 copper metabolism (Murr1) domain containing 1 protein_coding Homo_sapiens

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