ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000053141 Ptprt 10090 - 2:161521990-162661147 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000109441 Ptprt-004 161527509-162661147 protein_coding
  ENSMUST00000109442 Ptprt-002 161526357-162661094 protein_coding
  ENSMUST00000109443 Ptprt-003 161521990-162661147 protein_coding
  ENSMUST00000109445 Ptprt-001 161521990-162661147 protein_coding
  ENSMUST00000129015 Ptprt-005 162012015-162135451 processed_transcript
  ENSMUST00000153770 Ptprt-006 161698009-161800155 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000109441ENSMUST00000109443ENSMUST00000109445ENSMUST00000129015
Transcript ID C166 Tie2+ EC mES
ENSMUST00000109441 0.010±0.00 N/A N/A
ENSMUST00000109443 0.003±0.00 0.037±0.04 0.069±0.00
ENSMUST00000109445 0.003±0.00 0.052±0.05 0.063±0.00
ENSMUST00000129015 0.141±0.06 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0004E5 CIL_0004E5_0002 CGP
CIL_0004E4 CIL_0004E4_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 IMP protein tyrosine phosphatase activity
GO:0005886 TAS plasma membrane
GO:0006470 IDA protein dephosphorylation
GO:0008013 IDA beta-catenin binding
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016790 IDA thiolester hydrolase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0045294 IDA alpha-catenin binding
GO:0045295 IPI gamma-catenin binding
GO:0045296 IPI cadherin binding
GO:0051393 IDA alpha-actinin binding
GO:0070097 IPI delta-catenin binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000196090 PTPRT protein tyrosine phosphatase, receptor type, T protein_coding Homo_sapiens

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