ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054256 Msi1 10090 + 5:115429599-115455698 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000067168 Msi1-004 115429997-115454080 protein_coding
  ENSMUST00000130849 Msi1-009 115435498-115445694 retained_intron
  ENSMUST00000131079 Msi1-003 115430605-115450906 protein_coding
  ENSMUST00000136586 Msi1-008 115434996-115450883 protein_coding
  ENSMUST00000139918 Msi1-006 115433751-115450899 retained_intron
  ENSMUST00000145005 Msi1-005 115433392-115435651 retained_intron
  ENSMUST00000145840 Msi1-007 115434300-115445472 retained_intron
  ENSMUST00000150779 Msi1-001 115429599-115455698 protein_coding
  ENSMUST00000151444 Msi1-002 115429699-115448987 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000067168ENSMUST00000131079ENSMUST00000145840ENSMUST00000150779
Transcript ID C166 Tie2+ EC mES
ENSMUST00000067168 1.044±0.41 0.065±0.04 N/A
ENSMUST00000131079 0.482±0.00 N/A N/A
ENSMUST00000145840 N/A 0.050±0.00 N/A
ENSMUST00000150779 0.860±0.51 0.053±0.01 5.244±4.04

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007ZA CIL_0007ZA_0002 VISTA
CIL_0009CQ CIL_0009CQ_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003727 IDA single-stranded RNA binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005844 IDA polysome
GO:0008266 IDA poly(U) RNA binding
GO:0009725 IEA response to hormone
GO:0030855 IEA epithelial cell differentiation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010710 msi1 protein_coding Danio_rerio
ENSG00000135097 MSI1 musashi RNA-binding protein 1 protein_coding Homo_sapiens

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