ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054611 Kdm2a 10090 - 19:4314419-4398285 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047898 Kdm2a-001 4314419-4398285 protein_coding
  ENSMUST00000075856 Kdm2a-201 4316170-4397077 protein_coding
  ENSMUST00000116571 Kdm2a-005 4341350-4397080 protein_coding
  ENSMUST00000175682 Kdm2a-003 4350603-4397068 retained_intron
  ENSMUST00000175777 Kdm2a-004 4348196-4397076 retained_intron
  ENSMUST00000175959 Kdm2a-007 4350186-4362887 protein_coding
  ENSMUST00000175978 Kdm2a-009 4320177-4322803 retained_intron
  ENSMUST00000176483 Kdm2a-006 4388410-4397077 protein_coding
  ENSMUST00000176495 Kdm2a-002 4392471-4397095 retained_intron
  ENSMUST00000176497 Kdm2a-011 4329191-4333919 nonsense_mediated_decay
  ENSMUST00000176532 Kdm2a-010 4319253-4322548 nonsense_mediated_decay
  ENSMUST00000176653 Kdm2a-008 4324906-4334001 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000047898ENSMUST00000075856
Transcript ID C166 Tie2+ EC mES
ENSMUST00000047898 N/A 1.035±0.12 1.252±0.25
ENSMUST00000075856 40.551±2.75 11.683±5.11 7.840±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0008270 IEA zinc ion binding
GO:0045322 IDA unmethylated CpG binding
GO:0070544 IEA histone H3-K36 demethylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059653 kdm2aa protein_coding Danio_rerio
ENSDARG00000078133 kdm2ab protein_coding Danio_rerio
ENSG00000173120 KDM2A lysine (K)-specific demethylase 2A protein_coding Homo_sapiens

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