ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000057182 Scn3a 10090 - 2:65457118-65567627 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000066432 Scn3a-201 65457118-65567492 protein_coding
  ENSMUST00000100069 Scn3a-001 65458263-65567627 protein_coding
  ENSMUST00000126837 Scn3a-002 65524748-65529404 protein_coding
  ENSMUST00000155838 Scn3a-003 65493125-65498599 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000066432ENSMUST00000100069
Transcript ID C166 Tie2+ EC mES
ENSMUST00000066432 N/A 0.016±0.00 N/A
ENSMUST00000100069 1.835±0.32 0.021±0.01 0.013±0.01

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0006CP CIL_0006CP_0002 CGP
CIL_0006CO CIL_0006CO_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001518 IEA voltage-gated sodium channel complex
GO:0005248 IBA voltage-gated sodium channel activity
GO:0005737 IDA cytoplasm
GO:0005886 IBA plasma membrane
GO:0016020 IDA membrane
GO:0019228 IBA neuronal action potential
GO:0034765 IEA regulation of ion transmembrane transport
GO:0035725 IBA sodium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062744 scn1lab protein_coding Danio_rerio
ENSG00000153253 SCN3A sodium channel, voltage-gated, type III, alpha subunit protein_coding Homo_sapiens

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