ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060681 Slc9a6 10090 + X:56609757-56664230 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000077741 Slc9a6-001 56609775-56664230 protein_coding
  ENSMUST00000114784 Slc9a6-002 56609817-56663841 protein_coding
  ENSMUST00000144068 Slc9a6-003 56609757-56634841 protein_coding
  ENSMUST00000202670 Slc9a6-004 56658245-56663829 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000077741ENSMUST00000114784ENSMUST00000144068ENSMUST00000202670
Transcript ID C166 Tie2+ EC mES
ENSMUST00000077741 N/A 0.685±0.00 1.198±0.22
ENSMUST00000114784 2.114±0.33 1.134±0.68 N/A
ENSMUST00000144068 2.547±0.65 2.710±0.51 N/A
ENSMUST00000202670 N/A 0.421±0.00 0.423±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000GK CIL_0000GK_0003 CGP
CIL_0000PQ CIL_0000PQ_0004 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0005768 IDA endosome
GO:0005769 IDA early endosome
GO:0005770 IDA late endosome
GO:0005789 IEA endoplasmic reticulum membrane
GO:0005886 IDA plasma membrane
GO:0006885 IEA regulation of pH
GO:0015385 IEA sodium:proton antiporter activity
GO:0015992 IMP proton transport
GO:0016021 IEA integral component of membrane
GO:0030425 IDA dendrite
GO:0031410 IDA cytoplasmic vesicle
GO:0031547 IMP brain-derived neurotrophic factor receptor signaling pathway
GO:0031901 IEA early endosome membrane
GO:0035725 IEA sodium ion transmembrane transport
GO:0043679 IDA axon terminus
GO:0044308 IDA axonal spine
GO:0045202 IDA synapse
GO:0048675 ISO axon extension
GO:0048812 ISO neuron projection morphogenesis
GO:0050808 IMP synapse organization
GO:0051386 IMP regulation of neurotrophin TRK receptor signaling pathway
GO:0055037 IDA recycling endosome
GO:0055038 IEA recycling endosome membrane
GO:0060996 IMP dendritic spine development
GO:0097484 ISO dendrite extension
GO:1902600 IEA hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009209 slc9a6a protein_coding Danio_rerio
ENSDARG00000075382 slc9a6b protein_coding Danio_rerio
ENSG00000198689 SLC9A6 solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6 protein_coding Homo_sapiens

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