ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000061894 Zscan20 10090 - 4:128583539-128610098 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000084276 Zscan20-006 128583539-128589962 processed_transcript
  ENSMUST00000097877 Zscan20-001 128583547-128610098 protein_coding
  ENSMUST00000135309 Zscan20-002 128585375-128610042 nonsense_mediated_decay
  ENSMUST00000141040 Zscan20-004 128604477-128609981 protein_coding
  ENSMUST00000147876 Zscan20-003 128604443-128609995 protein_coding
  ENSMUST00000151226 Zscan20-005 128601431-128610034 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000084276ENSMUST00000097877ENSMUST00000135309
Transcript ID C166 Tie2+ EC mES
ENSMUST00000084276 0.212±0.00 0.244±0.10 0.403±0.08
ENSMUST00000097877 0.755±0.16 0.232±0.00 0.247±0.01
ENSMUST00000135309 0.587±0.05 0.234±0.06 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008F1 CIL_0008F1_0002 VISTA
CIL_00097K CIL_00097K_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003682 IEA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000094859 si:dkey-11o15.10 protein_coding Danio_rerio
ENSDARG00000097059 si:dkey-159n16.4 protein_coding Danio_rerio
ENSDARG00000097776 ZSCAN20 protein_coding Danio_rerio
ENSG00000121903 ZSCAN20 zinc finger and SCAN domain containing 20 protein_coding Homo_sapiens

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