ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062077 Trim54 10090 + 5:31116712-31137630 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000013771 Trim54-001 31116712-31137628 protein_coding
  ENSMUST00000202769 Trim54-002 31116734-31137630 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; Tie2+ ECmESENSMUST00000013771ENSMUST00000202769
Transcript ID Tie2+ EC mES
ENSMUST00000013771 N/A 0.481±0.00
ENSMUST00000202769 0.026±0.00 0.127±0.02

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000EE CIL_0000EE_0002 CGP
CIL_0000ED CIL_0000ED_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0005875 IDA microtubule associated complex
GO:0007026 IDA negative regulation of microtubule depolymerization
GO:0007275 IEA multicellular organismal development
GO:0008017 IDA microtubule binding
GO:0008270 IEA zinc ion binding
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029907 trim54 protein_coding Danio_rerio
ENSG00000138100 TRIM54 tripartite motif containing 54 protein_coding Homo_sapiens

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