ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000067242 Lgi1 10090 + 19:38264536-38312214 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000087252 Lgi1-009 38264567-38308938 nonsense_mediated_decay
  ENSMUST00000130039 Lgi1-003 38265410-38301269 retained_intron
  ENSMUST00000134832 Lgi1-002 38264813-38269046 retained_intron
  ENSMUST00000196090 Lgi1-007 38264671-38306502 protein_coding
  ENSMUST00000197123 Lgi1-008 38264660-38297983 nonsense_mediated_decay
  ENSMUST00000198045 Lgi1-006 38264646-38306808 protein_coding
  ENSMUST00000198518 Lgi1-001 38264536-38312214 protein_coding
  ENSMUST00000199665 Lgi1-004 38264762-38265914 retained_intron
  ENSMUST00000199812 Lgi1-005 38264577-38306809 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; Tie2+ ECmESENSMUST00000087252ENSMUST00000196090ENSMUST00000198045ENSMUST00000198518
Transcript ID Tie2+ EC mES
ENSMUST00000087252 0.144±0.04 N/A
ENSMUST00000196090 N/A 0.066±0.00
ENSMUST00000198045 0.117±0.00 N/A
ENSMUST00000198518 0.036±0.01 0.067±0.01

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000104 CIL_000104_0002 CGP
CIL_00067L CIL_00067L_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005102 IEA receptor binding
GO:0005515 IPI protein binding
GO:0005615 ISS extracellular space
GO:0007411 IEA axon guidance
GO:0030054 IEA cell junction
GO:0030307 IEA positive regulation of cell growth
GO:0031175 IEA neuron projection development
GO:0045202 IEA synapse
GO:0050806 ISS positive regulation of synaptic transmission
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020493 lgi1a protein_coding Danio_rerio
ENSDARG00000058421 lgi1b protein_coding Danio_rerio
ENSG00000108231 LGI1 leucine-rich, glioma inactivated 1 protein_coding Homo_sapiens

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