ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000078578 Ube2d3 10090 + 3:135438149-135468198 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000106291 Ube2d3-002 135438234-135466058 protein_coding
  ENSMUST00000166033 Ube2d3-003 135438480-135466950 protein_coding
  ENSMUST00000196248 Ube2d3-008 135438864-135458163 retained_intron
  ENSMUST00000196446 Ube2d3-009 135438149-135465237 protein_coding
  ENSMUST00000196564 Ube2d3-016 135458648-135460686 retained_intron
  ENSMUST00000196591 Ube2d3-011 135438533-135459995 protein_coding
  ENSMUST00000196878 Ube2d3-007 135462458-135466520 retained_intron
  ENSMUST00000197134 Ube2d3-006 135439211-135466675 protein_coding
  ENSMUST00000197357 Ube2d3-014 135438529-135441597 processed_transcript
  ENSMUST00000197539 Ube2d3-004 135439137-135466673 protein_coding
  ENSMUST00000197814 Ube2d3-015 135454626-135460039 retained_intron
  ENSMUST00000197859 Ube2d3-001 135438565-135468198 protein_coding
  ENSMUST00000198685 Ube2d3-012 135438543-135463041 protein_coding
  ENSMUST00000198748 Ube2d3-005 135438754-135465297 nonsense_mediated_decay
  ENSMUST00000199582 Ube2d3-013 135438747-135455249 protein_coding
  ENSMUST00000199613 Ube2d3-010 135438316-135465286 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000106291ENSMUST00000166033ENSMUST00000196248ENSMUST00000196446ENSMUST00000197539ENSMUST00000197859ENSMUST00000198685ENSMUST00000198748
Transcript ID C166 Tie2+ EC mES
ENSMUST00000106291 83.535±7.50 129.693±6.08 26.432±2.20
ENSMUST00000166033 23.675±2.49 32.416±1.48 24.769±3.60
ENSMUST00000196248 N/A 2.593±0.81 0.926±0.00
ENSMUST00000196446 N/A 81.499±4.71 N/A
ENSMUST00000197539 21.522±1.83 44.685±2.17 16.905±3.91
ENSMUST00000197859 N/A 16.832±10.70 15.773±3.45
ENSMUST00000198685 N/A 58.582±0.00 N/A
ENSMUST00000198748 N/A 48.389±0.00 N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000209 ISS protein polyubiquitination
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005768 IEA endosome
GO:0005886 IEA plasma membrane
GO:0006281 IEA DNA repair
GO:0006513 IEA protein monoubiquitination
GO:0006915 IEA apoptotic process
GO:0016567 IEA protein ubiquitination
GO:0016881 IEA acid-amino acid ligase activity
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0070062 IEA extracellular vesicular exosome
GO:0070936 ISS protein K48-linked ubiquitination
GO:0070979 ISS protein K11-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000109332 UBE2D3 ubiquitin-conjugating enzyme E2D 3 protein_coding Homo_sapiens

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