ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000078671 Chd2 10090 - 7:73426638-73541830 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026895 Chd2-005 73500980-73541745 protein_coding
  ENSMUST00000038366 Chd2-004 73451813-73461733 processed_transcript
  ENSMUST00000169922 Chd2-001 73426638-73541746 protein_coding
  ENSMUST00000172704 Chd2-002 73507860-73537621 protein_coding
  ENSMUST00000173785 Chd2-003 73429988-73447233 protein_coding
  ENSMUST00000181971 Chd2-007 73449244-73455592 nonsense_mediated_decay
  ENSMUST00000197642 Chd2-015 73507890-73541736 protein_coding
  ENSMUST00000197800 Chd2-009 73538090-73541830 retained_intron
  ENSMUST00000198225 Chd2-017 73474583-73478828 retained_intron
  ENSMUST00000199601 Chd2-016 73497707-73502117 nonsense_mediated_decay
  ENSMUST00000199641 Chd2-012 73499642-73502036 protein_coding
  ENSMUST00000199809 Chd2-008 73426694-73468587 nonsense_mediated_decay
  ENSMUST00000199831 Chd2-013 73474576-73481002 processed_transcript
  ENSMUST00000200218 Chd2-011 73539798-73541525 processed_transcript
  ENSMUST00000200423 Chd2-014 73474582-73481004 protein_coding
  ENSMUST00000200492 Chd2-010 73539354-73541746 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000169922ENSMUST00000199809
Transcript ID C166 Tie2+ EC mES
ENSMUST00000169922 4.813±1.08 5.619±0.58 8.350±1.48
ENSMUST00000199809 4.317±0.81 5.851±0.32 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0006GY CIL_0006GY_0002 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001046 IMP core promoter sequence-specific DNA binding
GO:0004386 IEA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0007517 IMP muscle organ development
GO:0016568 IEA chromatin modification
GO:0042393 IDA histone binding
GO:0044822 IEA poly(A) RNA binding
GO:0060218 IMP hematopoietic stem cell differentiation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060687 chd2 protein_coding Danio_rerio
ENSG00000173575 CHD2 chromodomain helicase DNA binding protein 2 protein_coding Homo_sapiens

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