ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000079363 Gbp4 10090 - 5:105115767-105139586 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000100962 Gbp4-001 105115767-105139586 protein_coding
  ENSMUST00000196204 Gbp4-003 105115767-105139586 nonsense_mediated_decay
  ENSMUST00000196677 Gbp4-004 105122909-105139545 protein_coding
  ENSMUST00000197799 Gbp4-005 105125226-105139540 protein_coding
  ENSMUST00000198278 Gbp4-002 105133953-105139551 retained_intron
  ENSMUST00000199629 Gbp4-006 105122973-105139544 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECENSMUST00000100962ENSMUST00000196204
Transcript ID C166 Tie2+ EC
ENSMUST00000100962 0.080±0.00 N/A
ENSMUST00000196204 0.054±0.01 3.909±2.39

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000033 CIL_000033_000B CGP
CIL_000033 CIL_000033_000A CGP
CIL_000033 CIL_000033_000E CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0001933 IDA negative regulation of protein phosphorylation
GO:0003924 IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process
GO:0031397 IGI negative regulation of protein ubiquitination
GO:0032687 IMP negative regulation of interferon-alpha production
GO:0042308 IDA negative regulation of protein import into nucleus
GO:0050688 IMP regulation of defense response to virus
GO:0071346 IDA cellular response to interferon-gamma

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005627 CABZ01068209.1 protein_coding Danio_rerio
ENSDARG00000034063 CABZ01068208.1 protein_coding Danio_rerio
ENSDARG00000038668 gbp1 protein_coding Danio_rerio
ENSDARG00000038669 gbp2 protein_coding Danio_rerio
ENSDARG00000068857 gbp4 protein_coding Danio_rerio
ENSG00000183347 GBP6 guanylate binding protein family, member 6 protein_coding Homo_sapiens

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