ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000099481 Xndc1 10090 + 7:102065511-102083765 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000094130 Xndc1-002 102065758-102083081 protein_coding
  ENSMUST00000106950 Xndc1-001 102065511-102083762 protein_coding
  ENSMUST00000125197 Xndc1-005 102075917-102079266 retained_intron
  ENSMUST00000140395 Xndc1-008 102081058-102082591 processed_transcript
  ENSMUST00000141646 Xndc1-006 102065522-102070003 processed_transcript
  ENSMUST00000142629 Xndc1-003 102078784-102083765 nonsense_mediated_decay
  ENSMUST00000143839 Xndc1-009 102081061-102082521 retained_intron
  ENSMUST00000146450 Xndc1-007 102065593-102077880 protein_coding
  ENSMUST00000153176 Xndc1-004 102065520-102080295 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000094130ENSMUST00000106950ENSMUST00000142629ENSMUST00000153176
Transcript ID C166 Tie2+ EC mES
ENSMUST00000094130 3.132±0.39 1.338±0.23 N/A
ENSMUST00000106950 1.401±0.22 N/A N/A
ENSMUST00000142629 2.264±0.64 3.896±3.42 4.925±2.88
ENSMUST00000153176 1.469±0.36 0.774±0.03 2.909±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002ZS CIL_0002ZS_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000012 IEA single strand break repair
GO:0000139 IDA Golgi membrane
GO:0002121 IMP inter-male aggressive behavior
GO:0002124 IMP territorial aggressive behavior
GO:0003684 IEA damaged DNA binding
GO:0005515 IPI protein binding
GO:0005516 IDA calmodulin binding
GO:0005635 IDA nuclear envelope
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005886 IDA plasma membrane
GO:0006816 IMP calcium ion transport
GO:0007204 IPI positive regulation of cytosolic calcium ion concentration
GO:0007340 IMP acrosome reaction
GO:0008050 IMP female courtship behavior
GO:0010468 IMP regulation of gene expression
GO:0012505 IDA endomembrane system
GO:0015279 IDA store-operated calcium channel activity
GO:0019236 IMP response to pheromone
GO:0019992 IMP diacylglycerol binding
GO:0032590 IMP dendrite membrane
GO:0048047 IMP mating behavior, sex discrimination
GO:0070588 IDA calcium ion transmembrane transport
GO:1902436 IGI negative regulation of male mating behavior

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032263 zgc:110224 protein_coding Danio_rerio
ENSG00000254469 RP11-849H4.2 Putative short transient receptor potential channel 2-like protein protein_coding Homo_sapiens

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