ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048680 Hoxa9-001 ENSMUSG00000038227 10090 - 6:52223100-52227370 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000048680
Transcript ID C166 Tie2+ EC mES
ENSMUST00000048680 0.009±0.00 0.901±0.66 0.062±0.01

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007283 IGI spermatogenesis
GO:0007338 IGI single fertilization
GO:0008584 IGI male gonad development
GO:0009952 IGI anterior/posterior pattern specification
GO:0009954 IGI proximal/distal pattern formation
GO:0010468 IGI regulation of gene expression
GO:0019899 IEA enzyme binding
GO:0030879 IGI mammary gland development
GO:0035115 IGI embryonic forelimb morphogenesis
GO:0042118 IEA endothelial cell activation
GO:0043565 IEA sequence-specific DNA binding
GO:0045638 IDA negative regulation of myeloid cell differentiation
GO:0048706 IGI embryonic skeletal system development
GO:0060065 IGI uterus development
GO:0060216 IGI definitive hemopoiesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000153363 hmx3b-001 protein_coding Danio_rerio 0.0000000002 73
ENST00000303450 HOXC9-001 protein_coding Homo_sapiens 2.8026e-45 187
ENST00000312492 HOXC5-001 protein_coding Homo_sapiens 0.0000002 62
ENST00000343483 HOXA9-001 protein_coding Homo_sapiens 0 2276
ENST00000357878 HMX3-001 protein_coding Homo_sapiens 0.00000001 66
ENST00000396345 HOXA9-003 protein_coding Homo_sapiens 0 571
ENST00000470747 HOXA10-HOXA9-001 protein_coding Homo_sapiens 0 569
ENST00000487384 HOXA9-004 processed_transcript Homo_sapiens 0 684
ENST00000489695 HOXA9-005 processed_transcript Homo_sapiens 0 385
ENST00000497089 HOXA9-002 processed_transcript Homo_sapiens 0 1144
ENST00000504557 HOXC9-003 processed_transcript Homo_sapiens 1.4013e-45 187
ENST00000508190 HOXC9-002 protein_coding Homo_sapiens 2.8026e-45 187
ENST00000513209 RP11-834C11.12-001 protein_coding Homo_sapiens 0.00000008 62

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