ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109546 Vcan-001 ENSMUSG00000021614 10090 - 13:89655312-89742509 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000109546
Transcript ID C166 Tie2+ EC mES
ENSMUST00000109546 0.177±0.04 0.027±0.00 2.150±1.29

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IEA osteoblast differentiation
GO:0005509 IEA calcium ion binding
GO:0005540 IEA hyaluronic acid binding
GO:0005576 IDA extracellular region
GO:0005578 IDA proteinaceous extracellular matrix
GO:0005615 IEA extracellular space
GO:0007155 IEA cell adhesion
GO:0007507 IMP heart development
GO:0008347 IEA glial cell migration
GO:0016020 IEA membrane
GO:0030246 IEA carbohydrate binding
GO:0031012 IEA extracellular matrix
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265077 VCAN-001 protein_coding Homo_sapiens 0 6311
ENST00000342785 VCAN-201 protein_coding Homo_sapiens 0 2471
ENST00000343200 VCAN-202 protein_coding Homo_sapiens 0 3753
ENST00000502527 VCAN-005 protein_coding Homo_sapiens 0 1267
ENST00000503923 VCAN-008 retained_intron Homo_sapiens 0 499
ENST00000505615 VCAN-012 retained_intron Homo_sapiens 0 780
ENST00000507162 VCAN-011 processed_transcript Homo_sapiens 0 429
ENST00000512590 VCAN-002 protein_coding Homo_sapiens 0 2322
ENST00000513016 VCAN-006 processed_transcript Homo_sapiens 0 3557
ENST00000513960 VCAN-003 protein_coding Homo_sapiens 0 1363
ENST00000513984 VCAN-007 protein_coding Homo_sapiens 0 1343
ENST00000515397 VCAN-010 retained_intron Homo_sapiens 0 385

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