ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: zinc finger, CCHC domain containing 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000257177 ZCCHC11-005 ENSG00000134744 9606 - 1:52423275-52552982 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHHSECHUVECENST00000257177
Transcript ID HAoEC HHSEC HUVEC
ENST00000257177 1.717±0.66 2.302±0.00 2.301±1.84

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001816 IEA cytokine production
GO:0003676 IEA nucleic acid binding
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005634 IEA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0010586 ISS miRNA metabolic process
GO:0010587 IMP miRNA catabolic process
GO:0016779 IEA nucleotidyltransferase activity
GO:0019827 IMP stem cell maintenance
GO:0031054 IMP pre-miRNA processing
GO:0031123 IDA RNA 3'-end processing
GO:0031664 IEA regulation of lipopolysaccharide-mediated signaling pathway
GO:0032088 IEA negative regulation of NF-kappaB transcription factor activity
GO:0032755 IEA positive regulation of interleukin-6 production
GO:0044822 IDA poly(A) RNA binding
GO:0050265 IDA RNA uridylyltransferase activity
GO:0070062 IDA extracellular vesicular exosome
GO:0070102 IEA interleukin-6-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097925 Zcchc11-001 protein_coding Mus_musculus 0 4586
ENSMUST00000043368 Zcchc11-201 protein_coding Mus_musculus 0 4490
ENSMUST00000155068 Zcchc11-004 protein_coding Mus_musculus 0 3219
ENSMUST00000145590 Zcchc11-003 processed_transcript Mus_musculus 0 946
ENSMUST00000128042 Zcchc11-002 protein_coding Mus_musculus 0 656
ENSMUST00000151349 Zcchc11-009 processed_transcript Mus_musculus 0 575
ENSMUST00000127602 Zcchc11-010 processed_transcript Mus_musculus 0 342
ENSMUST00000106673 Zcchc11-005 protein_coding Mus_musculus 0 324
ENSMUST00000138809 Zcchc11-006 processed_transcript Mus_musculus 0 298
ENSMUST00000153916 Zcchc11-007 processed_transcript Mus_musculus 0 296
ENSMUST00000138088 Zcchc11-008 processed_transcript Mus_musculus 3e-25 122

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