ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description: versican
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265077 VCAN-001 ENSG00000038427 9606 + 5:83471465-83582303 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHMVEC-DHUVECENST00000265077
Transcript ID HAoEC HMVEC-D HUVEC
ENST00000265077 0.206±0.08 0.102±0.00 0.046±0.04

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IDA osteoblast differentiation
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005539 TAS glycosaminoglycan binding
GO:0005540 IEA hyaluronic acid binding
GO:0005576 TAS extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IDA extracellular space
GO:0005796 TAS Golgi lumen
GO:0005975 TAS carbohydrate metabolic process
GO:0007155 IEA cell adhesion
GO:0007275 TAS multicellular organismal development
GO:0007507 IEA heart development
GO:0008037 TAS cell recognition
GO:0008347 IDA glial cell migration
GO:0016020 IDA membrane
GO:0030198 TAS extracellular matrix organization
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0030204 TAS chondroitin sulfate metabolic process
GO:0030206 TAS chondroitin sulfate biosynthetic process
GO:0030207 TAS chondroitin sulfate catabolic process
GO:0030208 TAS dermatan sulfate biosynthetic process
GO:0030246 IEA carbohydrate binding
GO:0031012 IDA extracellular matrix
GO:0043202 TAS lysosomal lumen
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109546 Vcan-001 protein_coding Mus_musculus 0 6311
ENSMUST00000159910 Vcan-004 protein_coding Mus_musculus 0 3552
ENSMUST00000109544 Vcan-006 protein_coding Mus_musculus 0 2322
ENSMUST00000109543 Vcan-005 protein_coding Mus_musculus 0 1371
ENSMUST00000159337 Vcan-002 protein_coding Mus_musculus 0 1360
ENSMUST00000160029 Vcan-003 retained_intron Mus_musculus 0 736
ENSMUST00000160740 Vcan-008 protein_coding Mus_musculus 0 510
ENSMUST00000162715 Vcan-007 protein_coding Mus_musculus 0 331
ENSDART00000149917 acanb-001 protein_coding Danio_rerio 8e-34 152

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