ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: homeobox C5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000312492 HOXC5-001 ENSG00000172789 9606 + 12:54032853-54035358 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHUVECENST00000312492
Transcript ID HAoEC HUVEC
ENST00000312492 0.047±0.00 0.013±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0009952 IEA anterior/posterior pattern specification
GO:0030054 IDA cell junction
GO:0043565 IEA sequence-specific DNA binding
GO:0048706 IEA embryonic skeletal system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001709 Hoxc5-001 protein_coding Mus_musculus 0 1748
ENSMUST00000174869 Hoxc5-002 processed_transcript Mus_musculus 0 468
ENSMUST00000114425 Hoxa9-002 protein_coding Mus_musculus 0.0000002 62
ENSMUST00000154641 Hoxa9-004 processed_transcript Mus_musculus 0.0000002 62
ENSMUST00000048680 Hoxa9-001 protein_coding Mus_musculus 0.0000002 62

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