ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: protocadherin beta 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000341948 PCDHB13-001 ENSG00000187372 9606 + 5:141213919-141218979 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000341948
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000341948 0.098±0.04 0.174±0.06 0.684±0.00 0.731±0.00 0.234±0.18

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007268 TAS synaptic transmission
GO:0007416 TAS synapse assembly
GO:0016020 IEA membrane
GO:0016021 NAS integral component of membrane
GO:0016339 NAS calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000051442 Pcdhb16-001 protein_coding Mus_musculus 0 1729
ENSMUST00000053856 Pcdhb17-001 protein_coding Mus_musculus 0 1140
ENSMUST00000052387 Pcdhb14-001 protein_coding Mus_musculus 0 948
ENSMUST00000056522 Pcdhb2-001 protein_coding Mus_musculus 0 894
ENSMUST00000056915 Pcdhb13-001 protein_coding Mus_musculus 0 869
ENSMUST00000059571 Pcdhb19-001 protein_coding Mus_musculus 0 850
ENSMUST00000056712 Pcdhb4-001 protein_coding Mus_musculus 0 845
ENSMUST00000061717 Pcdhb6-001 protein_coding Mus_musculus 0 841
ENSMUST00000061405 Pcdhb21-001 protein_coding Mus_musculus 0 832
ENSMUST00000053073 Pcdhb11-001 protein_coding Mus_musculus 0 830
ENSMUST00000051163 Pcdhb8-001 protein_coding Mus_musculus 0 819
ENSMUST00000051754 Pcdhb3-001 protein_coding Mus_musculus 0 789
ENSMUST00000050034 Pcdhb15-001 protein_coding Mus_musculus 0 763
ENSMUST00000051126 Pcdhb10-001 protein_coding Mus_musculus 2e-31 143
ENSMUST00000055495 Pcdhb12-001 protein_coding Mus_musculus 2e-26 126

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