ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: SP140 nuclear body protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000417495 SP140-004 ENSG00000079263 9606 + 2:230225742-230313214 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 TAS:IEA nucleus
GO:0005635 TAS nuclear envelope
GO:0005654 TAS nucleoplasm
GO:0005737 IEA cytoplasm
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0006952 TAS defense response
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072767 Arhgef12-201 protein_coding Mus_musculus 0 436
ENSMUST00000165665 Arhgef12-202 protein_coding Mus_musculus 0 436
ENSMUST00000080204 Sp140-001 protein_coding Mus_musculus 0 433
ENSMUST00000189121 Gm2427-001 unprocessed_pseudogene Mus_musculus 0 425
ENSMUST00000160010 Gm7281-001 unprocessed_pseudogene Mus_musculus 0 364
ENSMUST00000162896 Gm6264-001 transcribed_unprocessed_pseudogene Mus_musculus 0 270
ENSMUST00000186987 Gm18342-001 unprocessed_pseudogene Mus_musculus 0 255
ENSMUST00000160119 Sp140-006 retained_intron Mus_musculus 9.99967e-42 176
ENSMUST00000160487 Gm2389-001 unprocessed_pseudogene Mus_musculus 3e-27 128
ENSMUST00000161497 Sp140-004 protein_coding Mus_musculus 5e-25 121

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