ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info

Description: RNA polymerase II associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000562303 RPAP1-005 ENSG00000103932 9606 - 15:41517179-41544245 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHUVECENST00000562303
Transcript ID BECs HUVEC
ENST00000562303 0.723±0.00 0.393±0.25

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0005488 IEA binding
GO:0005634 IEA nucleus
GO:0032774 IEA RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000139311 Rpap1-003 retained_intron Mus_musculus 0 2750
ENSMUST00000136419 Rpap1-005 nonsense_mediated_decay Mus_musculus 0 2745
ENSMUST00000048493 Rpap1-002 protein_coding Mus_musculus 0 2745
ENSMUST00000099529 Rpap1-001 protein_coding Mus_musculus 0 2745
ENSMUST00000110793 Rpap1-006 protein_coding Mus_musculus 0 2745
ENSMUST00000184294 Rpap1-004 nonsense_mediated_decay Mus_musculus 0 1576
ENSMUST00000156506 Rpap1-007 retained_intron Mus_musculus 0 662
ENSMUST00000141800 Rpap1-008 processed_transcript Mus_musculus 0 435
ENSMUST00000115636 Suv39h1-004 protein_coding Mus_musculus 0.000000004 69
ENSMUST00000167619 Diap2-201 protein_coding Mus_musculus 0.000000004 69
ENSMUST00000113320 Diap2-006 protein_coding Mus_musculus 0.000000004 69
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000001 68

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