ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: nuclear factor I/X (CCAAT-binding transcription factor)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000585575 NFIX-006 ENSG00000008441 9606 + 19:13024032-13094649 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HUVECENST00000585575
Transcript ID HUVEC
ENST00000585575 0.011±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003700 IEA:TAS sequence-specific DNA binding transcription factor activity
GO:0003705 TAS RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006260 IEA DNA replication
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109764 Nfix-001 protein_coding Mus_musculus 0 2366
ENSMUST00000126806 Nfix-005 protein_coding Mus_musculus 0 2281
ENSMUST00000099070 Nfix-002 protein_coding Mus_musculus 0 1916
ENSMUST00000076715 Nfix-003 protein_coding Mus_musculus 0 1441
ENSMUST00000109762 Nfix-004 protein_coding Mus_musculus 0 1430
ENSDART00000090235 nfixb-202 protein_coding Danio_rerio 0 736
ENSDART00000139001 nfixb-001 protein_coding Danio_rerio 0 726
ENSDART00000044670 nfixb-201 protein_coding Danio_rerio 0 713
ENSDART00000135861 nfixa-001 protein_coding Danio_rerio 0 531
ENSMUST00000117966 Nfic-004 protein_coding Mus_musculus 0 503
ENSMUST00000078185 Nfic-005 protein_coding Mus_musculus 0 499
ENSMUST00000020461 Nfic-002 protein_coding Mus_musculus 0 499
ENSMUST00000105321 Nfic-001 protein_coding Mus_musculus 0 499
ENSDART00000090237 nfia-201 protein_coding Danio_rerio 0 488
ENSDART00000090242 nfia-202 protein_coding Danio_rerio 0 488
ENSDART00000138233 nfia-001 protein_coding Danio_rerio 0 483
ENSDART00000138382 nfia-002 protein_coding Danio_rerio 0 481
ENSMUST00000132236 Nfix-006 retained_intron Mus_musculus 2.8026e-45 187

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