ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: PDZ and LIM domain 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000615540 PDLIM5-205 ENSG00000163110 9606 + 4:94451857-94668227 protein_coding

Homo sapiens Ensembl GRCh38

Genome
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Expression Patterns

No expression data.

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 ISS actin binding
GO:0005080 ISS protein kinase C binding
GO:0005515 IEA protein binding
GO:0005829 ISS cytosol
GO:0008270 IEA zinc ion binding
GO:0014069 ISS postsynaptic density
GO:0015629 IDA actin cytoskeleton
GO:0016020 ISS membrane
GO:0030018 IEA Z disc
GO:0030054 IEA cell junction
GO:0042805 ISS actinin binding
GO:0043005 IEA neuron projection
GO:0045211 IEA postsynaptic membrane
GO:0047485 IEA protein N-terminus binding
GO:0051963 ISS regulation of synapse assembly
GO:0061001 ISS regulation of dendritic spine morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029941 Pdlim5-001 protein_coding Mus_musculus 0 957
ENSMUST00000058626 Pdlim5-201 protein_coding Mus_musculus 0 769
ENSMUST00000170361 Pdlim5-011 protein_coding Mus_musculus 0 721
ENSMUST00000090134 Pdlim5-010 protein_coding Mus_musculus 0 418
ENSMUST00000168967 Pdlim5-003 protein_coding Mus_musculus 0 418

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