ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: ribosomal protein S20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000008988 RPS20 9606 - 8:56067295-56074581 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000009589 RPS20-002 56072947-56074506 protein_coding
  ENST00000518875 RPS20-008 56073316-56074498 protein_coding
  ENST00000519369 RPS20-005 56073462-56074506 retained_intron
  ENST00000519606 RPS20-007 56073075-56074506 protein_coding
  ENST00000519807 RPS20-001 56067295-56074509 protein_coding
  ENST00000520490 RPS20-006 56073054-56074472 processed_transcript
  ENST00000520627 RPS20-011 56073054-56074510 protein_coding
  ENST00000521262 RPS20-003 56073054-56074510 protein_coding
  ENST00000521289 RPS20-010 56073127-56074506 retained_intron
  ENST00000523936 RPS20-009 56073073-56074356 protein_coding
  ENST00000524349 RPS20-004 56073042-56074506 protein_coding
  ENST00000618656 RPS20-201 56069738-56074581 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000009589ENST00000519606ENST00000520627ENST00000524349ENST00000618656
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000009589 1740.085±7.48 294.843±86.73 465.581±0.00 380.657±0.00 688.176±669.17
ENST00000519606 N/A 326.095±63.93 N/A N/A 293.986±125.21
ENST00000520627 1167.325±207.08 512.712±139.36 516.720±0.00 215.728±0.00 322.580±146.22
ENST00000524349 N/A N/A N/A N/A 1.938±0.00
ENST00000618656 N/A 240.362±94.08 N/A 243.461±0.00 199.931±79.59

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0001U6 CIL_0001U6_0001 CGP
CIL_0002RN CIL_0002RN_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 IEA RNA binding
GO:0003735 IEA:IDA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0006412 IEA:IC translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0015935 IEA small ribosomal subunit
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022627 IDA cytosolic small ribosomal subunit
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000028234 Rps20 protein_coding Mus_musculus

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