ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: ribosomal protein S20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000009589 RPS20-002 ENSG00000008988 9606 - 8:56072947-56074506 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000009589
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000009589 1740.085±7.48 294.843±86.73 465.581±0.00 380.657±0.00 688.176±669.17

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003735 IEA:IDA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006412 IEA:IC translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0015935 IEA small ribosomal subunit
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022627 IDA cytosolic small ribosomal subunit
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000138502 Rps20-001 protein_coding Mus_musculus 0 549
ENSMUST00000103009 Rps20-002 retained_intron Mus_musculus 0 464
ENSMUST00000130128 Rps20-003 retained_intron Mus_musculus 0 363
ENSMUST00000154056 Gm4997-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000194675 Gm38247-001 processed_pseudogene Mus_musculus 0 342

Loading