ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: ring finger protein 216
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000011275 RNF216 9606 - 7:5620047-5781739 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000389900 RNF216-004 5622695-5761138 nonsense_mediated_decay
  ENST00000389902 RNF216-003 5622607-5781739 protein_coding
  ENST00000411812 RNF216-006 5741579-5781646 nonsense_mediated_decay
  ENST00000416985 RNF216-005 5761011-5781620 protein_coding
  ENST00000425013 RNF216-001 5620047-5781696 protein_coding
  ENST00000469375 RNF216-010 5622927-5650015 processed_transcript
  ENST00000476345 RNF216-007 5761088-5780292 processed_transcript
  ENST00000479541 RNF216-008 5729530-5739492 retained_intron
  ENST00000484458 RNF216-009 5641348-5713441 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHHSECHMVEC-DHUVECENST00000389900ENST00000389902ENST00000425013
Transcript ID HAoEC HHSEC HMVEC-D HUVEC
ENST00000389900 1.554±0.00 N/A N/A 3.225±0.06
ENST00000389902 5.284±0.99 N/A 2.323±0.00 3.213±0.95
ENST00000425013 7.811±3.25 1.414±0.00 9.021±0.00 6.186±1.90

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000854 CIL_000854_0001 VISTA
CIL_00027J CIL_00027J_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006915 IEA apoptotic process
GO:0008270 IEA zinc ion binding
GO:0016032 IEA viral process
GO:0016874 IEA ligase activity
GO:0032648 IDA regulation of interferon-beta production
GO:0043161 IDA proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0050691 IDA regulation of defense response to virus by host
GO:0070936 IDA protein K48-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087893 rnf216 protein_coding Danio_rerio
ENSMUSG00000045078 Rnf216 protein_coding Mus_musculus

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