ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045078 Rnf216 10090 - 5:142990893-143112994 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053498 Rnf216-001 142990893-143112994 protein_coding
  ENSMUST00000197217 Rnf216-006 143081018-143087827 retained_intron
  ENSMUST00000197296 Rnf216-008 142992617-143098505 nonsense_mediated_decay
  ENSMUST00000198179 Rnf216-005 143090273-143112980 processed_transcript
  ENSMUST00000198190 Rnf216-003 143067165-143112980 retained_intron
  ENSMUST00000199044 Rnf216-009 143015373-143016774 retained_intron
  ENSMUST00000200002 Rnf216-004 143090462-143112982 processed_transcript
  ENSMUST00000200430 Rnf216-007 142992649-143098505 nonsense_mediated_decay
  ENSMUST00000200607 Rnf216-002 142991820-143112980 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000053498ENSMUST00000197296ENSMUST00000200607
Transcript ID C166 Tie2+ EC mES
ENSMUST00000053498 12.350±2.23 5.948±2.43 3.245±0.48
ENSMUST00000197296 N/A 4.046±0.00 N/A
ENSMUST00000200607 5.432±0.47 4.178±0.78 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000854 CIL_000854_0002 VISTA
CIL_00027J CIL_00027J_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006915 IEA apoptotic process
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0032648 ISS regulation of interferon-beta production
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0050691 ISS regulation of defense response to virus by host
GO:0070936 ISS protein K48-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087893 rnf216 protein_coding Danio_rerio
ENSG00000011275 RNF216 ring finger protein 216 protein_coding Homo_sapiens

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