ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: RUN and FYVE domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000018189 RUFY3 9606 + 4:70704204-70807315 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000226328 RUFY3-001 70722011-70793557 protein_coding
  ENST00000381006 RUFY3-002 70721995-70807315 protein_coding
  ENST00000417478 RUFY3-005 70704801-70790082 protein_coding
  ENST00000502653 RUFY3-003 70734434-70807102 protein_coding
  ENST00000503025 RUFY3-010 70794673-70806567 retained_intron
  ENST00000503876 RUFY3-007 70704424-70768622 protein_coding
  ENST00000504805 RUFY3-009 70784866-70800182 nonsense_mediated_decay
  ENST00000507333 RUFY3-015 70793876-70806816 processed_transcript
  ENST00000512103 RUFY3-012 70788939-70806871 nonsense_mediated_decay
  ENST00000512331 RUFY3-016 70799405-70806748 processed_transcript
  ENST00000513593 RUFY3-013 70802983-70806794 processed_transcript
  ENST00000513597 RUFY3-004 70734346-70775206 protein_coding
  ENST00000514898 RUFY3-008 70704204-70705230 protein_coding
  ENST00000515442 RUFY3-014 70802871-70806596 processed_transcript
  ENST00000515479 RUFY3-011 70799448-70806553 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000226328ENST00000381006ENST00000417478ENST00000502653ENST00000512103
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000226328 N/A 1.262±1.16 2.162±0.00 N/A 1.395±0.57
ENST00000381006 N/A 0.768±0.41 N/A 1.511±0.00 1.739±0.60
ENST00000417478 N/A 1.794±1.42 N/A N/A 2.263±0.71
ENST00000502653 2.639±0.00 0.980±0.29 N/A N/A 2.635±0.98
ENST00000512103 17.955±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000D6 CIL_0000D6_0001 CGP
CIL_0005LT CIL_0005LT_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0030175 ISS filopodium
GO:0030426 ISS growth cone
GO:0046872 IEA metal ion binding
GO:0050771 ISS negative regulation of axonogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029692 rufy3 protein_coding Danio_rerio
ENSMUSG00000029291 Rufy3 protein_coding Mus_musculus

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