ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029291 Rufy3 10090 + 5:88565040-88651392 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031229 Rufy3-001 88583536-88642696 protein_coding
  ENSMUST00000196686 Rufy3-004 88583794-88640928 protein_coding
  ENSMUST00000196894 Rufy3-003 88565040-88642695 protein_coding
  ENSMUST00000197664 Rufy3-007 88583577-88585912 retained_intron
  ENSMUST00000198965 Rufy3-002 88565040-88651392 protein_coding
  ENSMUST00000199207 Rufy3-006 88583578-88617677 retained_intron
  ENSMUST00000199312 Rufy3-005 88583513-88640927 protein_coding
  ENSMUST00000199956 Rufy3-008 88646691-88648318 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000196894ENSMUST00000197664ENSMUST00000198965
Transcript ID C166 Tie2+ EC mES
ENSMUST00000196894 N/A 1.314±0.30 N/A
ENSMUST00000197664 N/A 1.345±0.00 N/A
ENSMUST00000198965 2.439±0.33 4.304±1.41 3.143±1.53

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000D6 CIL_0000D6_0002 CGP
CIL_0005LT CIL_0005LT_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0030175 IEA filopodium
GO:0030426 IEA growth cone
GO:0050771 IEA negative regulation of axonogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029692 rufy3 protein_coding Danio_rerio
ENSG00000018189 RUFY3 RUN and FYVE domain containing 3 protein_coding Homo_sapiens

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