ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: cystinosin, lysosomal cystine transporter
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000040531 CTNS 9606 + 17:3636468-3661542 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000046640 CTNS-001 3636468-3661538 protein_coding
  ENST00000381870 CTNS-002 3636479-3661542 protein_coding
  ENST00000399306 CTNS-005 3637104-3650519 protein_coding
  ENST00000452111 CTNS-003 3636725-3648931 protein_coding
  ENST00000467663 CTNS-006 3636758-3655263 nonsense_mediated_decay
  ENST00000488623 CTNS-007 3636760-3655088 processed_transcript
  ENST00000495445 CTNS-004 3636747-3647604 retained_intron
  ENST00000574218 CTNS-010 3636762-3656551 protein_coding
  ENST00000574776 CTNS-009 3636729-3656526 protein_coding
  ENST00000576979 CTNS-008 3640147-3656513 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000046640ENST00000381870
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000046640 8.560±0.00 3.348±1.44 6.911±0.00 7.700±4.39
ENST00000381870 N/A 3.061±1.97 2.868±0.00 1.989±0.86

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002088 IEA lens development in camera-type eye
GO:0005764 IDA lysosome
GO:0005765 IDA lysosomal membrane
GO:0005770 IDA late endosome
GO:0005886 IDA plasma membrane
GO:0006520 NAS cellular amino acid metabolic process
GO:0006749 IMP glutathione metabolic process
GO:0007420 IMP brain development
GO:0007616 IEA long-term memory
GO:0007625 IEA grooming behavior
GO:0007628 IEA adult walking behavior
GO:0008542 IEA visual learning
GO:0015184 IMP L-cystine transmembrane transporter activity
GO:0015811 IMP L-cystine transport
GO:0016021 IEA integral component of membrane
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0045111 IDA intermediate filament cytoskeleton
GO:0046034 IMP ATP metabolic process
GO:0050890 IMP cognition
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008890 ctns protein_coding Danio_rerio
ENSMUSG00000005949 Ctns protein_coding Mus_musculus

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