ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: remodeling and spacing factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000048649 RSF1 9606 - 11:77659996-77821017 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000308488 RSF1-001 77659996-77821017 protein_coding
  ENST00000440064 RSF1-004 77725573-77820706 protein_coding
  ENST00000467567 RSF1-002 77762050-77820869 retained_intron
  ENST00000480887 RSF1-003 77666230-77703533 protein_coding
  ENST00000526324 RSF1-006 77683769-77725680 protein_coding
  ENST00000528095 RSF1-005 77701119-77820711 protein_coding
  ENST00000529470 RSF1-012 77675079-77677061 retained_intron
  ENST00000530604 RSF1-008 77813354-77820699 processed_transcript
  ENST00000531026 RSF1-007 77675095-77698528 protein_coding
  ENST00000531768 RSF1-011 77690966-77700761 retained_intron
  ENST00000532556 RSF1-010 77693593-77700998 protein_coding
  ENST00000534794 RSF1-009 77702401-77764690 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000308488ENST00000467567ENST00000480887ENST00000526324ENST00000528095ENST00000530604ENST00000531026
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000308488 0.851±0.10 1.534±1.01 N/A 1.167±0.00 1.994±1.08
ENST00000467567 0.910±0.00 N/A 2.627±0.00 N/A 2.037±0.00
ENST00000480887 1.084±0.00 1.070±0.30 N/A N/A 2.104±0.74
ENST00000526324 N/A 3.462±0.00 N/A 5.111±0.00 3.964±0.97
ENST00000528095 N/A 10.250±3.61 N/A N/A 4.493±0.96
ENST00000530604 9.262±0.82 N/A N/A N/A N/A
ENST00000531026 N/A N/A N/A N/A 13.013±1.95

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0001JG CIL_0001JG_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006334 IDA nucleosome assembly
GO:0006338 IDA chromatin remodeling
GO:0006352 IDA DNA-templated transcription, initiation
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0016584 IDA nucleosome positioning
GO:0031213 IEA:IPI RSF complex
GO:0034080 TAS CENP-A containing nucleosome assembly
GO:0042393 IDA histone binding
GO:0043392 IDA negative regulation of DNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0050434 IDA positive regulation of viral transcription

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068640 rsf1b.1 protein_coding Danio_rerio
ENSDARG00000093503 rsf1b.1 protein_coding Danio_rerio
ENSMUSG00000035623 Rsf1 protein_coding Mus_musculus

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