ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035623 Rsf1 10090 + 7:97579896-97692782 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042399 Rsf1-201 97579896-97692782 protein_coding
  ENSMUST00000107153 Rsf1-001 97579897-97692778 protein_coding
  ENSMUST00000123731 Rsf1-003 97662552-97686608 processed_transcript
  ENSMUST00000127891 Rsf1-004 97579907-97639463 processed_transcript
  ENSMUST00000135270 Rsf1-005 97669847-97680778 processed_transcript
  ENSMUST00000150288 Rsf1-006 97669492-97676180 retained_intron
  ENSMUST00000156060 Rsf1-002 97579897-97686420 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000042399ENSMUST00000107153ENSMUST00000123731ENSMUST00000156060
Transcript ID C166 Tie2+ EC mES
ENSMUST00000042399 N/A 2.277±0.87 1.854±0.35
ENSMUST00000107153 1.353±0.07 2.298±0.69 N/A
ENSMUST00000123731 N/A 5.012±0.00 5.249±0.00
ENSMUST00000156060 3.593±0.29 2.958±0.51 N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006334 IEA nucleosome assembly
GO:0006338 IEA chromatin remodeling
GO:0006352 IEA DNA-templated transcription, initiation
GO:0008270 IEA zinc ion binding
GO:0016584 IEA nucleosome positioning
GO:0031213 IEA RSF complex
GO:0042393 IEA histone binding
GO:0043392 IEA negative regulation of DNA binding
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0050434 IEA positive regulation of viral transcription

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068640 rsf1b.1 protein_coding Danio_rerio
ENSDARG00000093503 rsf1b.1 protein_coding Danio_rerio
ENSG00000048649 RSF1 remodeling and spacing factor 1 protein_coding Homo_sapiens

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