ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: unconventional SNARE in the ER 1 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000053501 USE1 9606 + 19:17215346-17219829 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263897 USE1-004 17215359-17219829 protein_coding
  ENST00000445667 USE1-201 17215398-17219829 protein_coding
  ENST00000593597 USE1-008 17215720-17219640 protein_coding
  ENST00000594399 USE1-009 17215829-17217670 retained_intron
  ENST00000594724 USE1-007 17215398-17219819 nonsense_mediated_decay
  ENST00000595101 USE1-002 17215388-17218826 protein_coding
  ENST00000596136 USE1-001 17215390-17219829 protein_coding
  ENST00000600970 USE1-003 17215375-17219829 nonsense_mediated_decay
  ENST00000601592 USE1-006 17215392-17217489 retained_intron
  ENST00000601662 USE1-005 17215346-17217617 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000263897ENST00000445667ENST00000593597ENST00000594399ENST00000594724ENST00000595101ENST00000596136ENST00000600970ENST00000601592
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000263897 42.892±5.52 8.578±6.29 16.794±0.00 9.325±0.00 12.900±11.60
ENST00000445667 N/A 1.140±0.00 N/A N/A N/A
ENST00000593597 N/A 2.248±0.89 N/A N/A 2.895±2.17
ENST00000594399 N/A N/A N/A N/A 0.356±0.19
ENST00000594724 N/A 2.304±0.69 N/A N/A N/A
ENST00000595101 N/A 0.287±0.04 2.815±0.00 1.122±0.00 1.042±0.44
ENST00000596136 N/A 3.106±1.14 N/A N/A N/A
ENST00000600970 N/A 3.194±0.00 N/A N/A N/A
ENST00000601592 N/A N/A N/A N/A 0.709±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0006GE CIL_0006GE_0001 CGP
CIL_0007CI CIL_0007CI_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0007029 IEA endoplasmic reticulum organization
GO:0007041 ISS lysosomal transport
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0030163 ISS protein catabolic process
GO:0032940 ISS secretion by cell
GO:0060628 IEA regulation of ER to Golgi vesicle-mediated transport
GO:0071786 IEA endoplasmic reticulum tubular network organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007250 use1 protein_coding Danio_rerio
ENSMUSG00000002395 Use1 protein_coding Mus_musculus

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