ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: choline kinase beta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100288 CHKB 9606 - 22:50578949-50601455 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000406938 CHKB-001 50578949-50582999 protein_coding
  ENST00000463053 CHKB-010 50580357-50601455 processed_transcript
  ENST00000464225 CHKB-012 50578963-50580253 processed_transcript
  ENST00000465842 CHKB-008 50581607-50582420 retained_intron
  ENST00000468532 CHKB-007 50579450-50582458 retained_intron
  ENST00000471515 CHKB-011 50578963-50580603 processed_transcript
  ENST00000476289 CHKB-006 50580357-50582854 retained_intron
  ENST00000479003 CHKB-004 50578966-50582820 retained_intron
  ENST00000481673 CHKB-003 50578963-50582845 retained_intron
  ENST00000484266 CHKB-005 50578963-50582824 retained_intron
  ENST00000489453 CHKB-009 50579804-50580780 retained_intron
  ENST00000492582 CHKB-002 50578959-50582854 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000406938ENST00000464225ENST00000468532ENST00000471515ENST00000476289ENST00000479003ENST00000481673ENST00000492582
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000406938 N/A 2.611±0.95 N/A N/A 11.172±6.97
ENST00000464225 58.350±8.84 4.685±1.26 132.360±0.00 29.060±0.00 14.711±4.84
ENST00000468532 N/A 3.239±0.30 51.512±0.00 N/A 1.656±0.00
ENST00000471515 34.749±0.00 6.210±1.91 N/A N/A N/A
ENST00000476289 N/A 2.357±0.45 N/A N/A 2.014±0.00
ENST00000479003 N/A N/A N/A N/A 10.364±10.22
ENST00000481673 8.166±2.81 3.416±1.46 44.269±0.00 14.191±0.00 9.169±7.02
ENST00000492582 N/A 1.500±0.11 N/A N/A 9.681±10.49

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002HR CIL_0002HR_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004103 IDA choline kinase activity
GO:0004305 IDA ethanolamine kinase activity
GO:0005524 IEA ATP binding
GO:0005829 TAS cytosol
GO:0006644 TAS phospholipid metabolic process
GO:0006646 IEA phosphatidylethanolamine biosynthetic process
GO:0006656 TAS phosphatidylcholine biosynthetic process
GO:0006657 IEA CDP-choline pathway
GO:0016310 IEA phosphorylation
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063167 chkb protein_coding Danio_rerio
ENSMUSG00000022617 Chkb protein_coding Mus_musculus

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