ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: solute carrier family 8 (sodium/calcium exchanger), member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100678 SLC8A3 9606 - 14:70044217-70189070 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000216568 SLC8A3-006 70044255-70080206 protein_coding
  ENST00000356921 SLC8A3-001 70044217-70189070 protein_coding
  ENST00000357887 SLC8A3-201 70044220-70189070 protein_coding
  ENST00000381269 SLC8A3-003 70044217-70189070 protein_coding
  ENST00000394330 SLC8A3-007 70044419-70080180 protein_coding
  ENST00000494208 SLC8A3-002 70044217-70189070 nonsense_mediated_decay
  ENST00000528359 SLC8A3-005 70045947-70168484 protein_coding
  ENST00000533541 SLC8A3-008 70046075-70080180 protein_coding
  ENST00000533899 SLC8A3-009 70059106-70060939 processed_transcript
  ENST00000534137 SLC8A3-004 70045947-70168484 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHUVECENST00000216568ENST00000394330ENST00000494208ENST00000528359ENST00000533541ENST00000534137
Transcript ID BECs HAoEC HHSEC HUVEC
ENST00000216568 N/A N/A 0.096±0.00 N/A
ENST00000394330 N/A 0.025±0.00 N/A N/A
ENST00000494208 0.008±0.00 0.019±0.01 0.054±0.00 0.017±0.01
ENST00000528359 N/A 0.044±0.05 N/A 0.009±0.01
ENST00000533541 N/A N/A 0.025±0.00 0.003±0.00
ENST00000534137 N/A 0.029±0.03 N/A 0.013±0.02

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002M6 CIL_0002M6_0001 CGP
CIL_0006J1 CIL_0006J1_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002244 IEA hematopoietic progenitor cell differentiation
GO:0005432 IEA calcium:sodium antiporter activity
GO:0005516 IEA calmodulin binding
GO:0005739 IEA mitochondrion
GO:0005874 IEA microtubule
GO:0005886 TAS plasma membrane
GO:0006811 TAS ion transport
GO:0006814 IEA sodium ion transport
GO:0006816 IEA calcium ion transport
GO:0007154 IEA cell communication
GO:0007596 TAS blood coagulation
GO:0015368 IEA calcium:cation antiporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0021537 IEA telencephalon development
GO:0030001 IEA metal ion transport
GO:0035725 IEA sodium ion transmembrane transport
GO:0042383 IEA sarcolemma
GO:0042995 IEA cell projection
GO:0043025 IEA neuronal cell body
GO:0043197 IEA dendritic spine
GO:0055085 TAS:IEA transmembrane transport
GO:0060402 IEA calcium ion transport into cytosol
GO:0070588 IEA calcium ion transmembrane transport
GO:0071320 IEA cellular response to cAMP
GO:1990034 IEA calcium ion export from cell
GO:1990035 IEA calcium ion import into cell

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004931 slc8a3 protein_coding Danio_rerio
ENSMUSG00000079055 Slc8a3 protein_coding Mus_musculus

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