ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000079055 Slc8a3 10090 - 12:81197915-81333180 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000064594 Slc8a3-004 81198276-81332959 protein_coding
  ENSMUST00000085238 Slc8a3-001 81197915-81333164 protein_coding
  ENSMUST00000182208 Slc8a3-002 81199446-81333180 protein_coding
  ENSMUST00000182366 Slc8a3-005 81202397-81294674 protein_coding
  ENSMUST00000183102 Slc8a3-003 81214024-81333180 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000064594ENSMUST00000085238ENSMUST00000182208ENSMUST00000182366ENSMUST00000183102
Transcript ID C166 Tie2+ EC mES
ENSMUST00000064594 0.008±0.00 0.050±0.03 0.032±0.00
ENSMUST00000085238 0.004±0.00 N/A 0.173±0.00
ENSMUST00000182208 N/A 0.058±0.00 0.098±0.04
ENSMUST00000182366 0.031±0.00 N/A N/A
ENSMUST00000183102 0.013±0.00 0.038±0.00 0.154±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002M6 CIL_0002M6_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002244 IMP hematopoietic progenitor cell differentiation
GO:0005432 IEA calcium:sodium antiporter activity
GO:0005739 IEA mitochondrion
GO:0005874 IEA microtubule
GO:0005886 IEA plasma membrane
GO:0005887 IC integral component of plasma membrane
GO:0006814 IEA sodium ion transport
GO:0007154 IEA cell communication
GO:0015368 IDA calcium:cation antiporter activity
GO:0021537 IEA telencephalon development
GO:0030001 IDA metal ion transport
GO:0035725 IEA sodium ion transmembrane transport
GO:0042383 IEA sarcolemma
GO:0042995 IEA cell projection
GO:0043025 IEA neuronal cell body
GO:0043197 IEA dendritic spine
GO:0060402 IEA calcium ion transport into cytosol
GO:0070588 IDA calcium ion transmembrane transport
GO:0071320 IEA cellular response to cAMP
GO:1990034 IEA calcium ion export from cell
GO:1990035 IEA calcium ion import into cell

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004931 slc8a3 protein_coding Danio_rerio
ENSG00000100678 SLC8A3 solute carrier family 8 (sodium/calcium exchanger), member 3 protein_coding Homo_sapiens

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