ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: spalt-like transcription factor 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101115 SALL4 9606 - 20:51784042-51802520 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000217086 SALL4-001 51784042-51802520 protein_coding
  ENST00000371539 SALL4-201 51784046-51802509 protein_coding
  ENST00000395997 SALL4-002 51784265-51802475 protein_coding
  ENST00000481363 SALL4-004 51792068-51793078 processed_transcript
  ENST00000483130 SALL4-003 51791983-51801586 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000217086ENST00000371539ENST00000395997ENST00000481363ENST00000483130
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000217086 N/A 0.045±0.03 0.024±0.00 N/A 0.082±0.05
ENST00000371539 0.147±0.00 0.069±0.02 0.188±0.00 0.127±0.00 0.123±0.08
ENST00000395997 N/A 0.003±0.00 N/A N/A 0.082±0.02
ENST00000481363 N/A 0.097±0.02 N/A N/A 0.160±0.00
ENST00000483130 N/A N/A N/A N/A 0.193±0.06

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007I5 CIL_0007I5_0001 CGP
CIL_0001H1 CIL_0001H1_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000792 IEA heterochromatin
GO:0001701 IEA in utero embryonic development
GO:0001833 IEA inner cell mass cell proliferation
GO:0001843 IEA neural tube closure
GO:0003281 IEA ventricular septum development
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007507 IEA heart development
GO:0009888 IEA tissue development
GO:0019827 IEA stem cell maintenance
GO:0021915 IEA neural tube development
GO:0030326 IEA embryonic limb morphogenesis
GO:0043234 IEA protein complex
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044485 sall4 protein_coding Danio_rerio
ENSMUSG00000027547 Sall4 protein_coding Mus_musculus

Loading