ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027547 Sall4 10090 - 2:168748332-168767943 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029061 Sall4-001 168748332-168767201 protein_coding
  ENSMUST00000075044 Sall4-005 168748332-168767029 protein_coding
  ENSMUST00000103074 Sall4-002 168748332-168767201 protein_coding
  ENSMUST00000125138 Sall4-007 168756614-168767943 processed_transcript
  ENSMUST00000130640 Sall4-003 168756753-168767117 processed_transcript
  ENSMUST00000137536 Sall4-004 168756181-168765246 protein_coding
  ENSMUST00000150588 Sall4-006 168754915-168755943 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; Tie2+ ECmESENSMUST00000029061ENSMUST00000075044
Transcript ID Tie2+ EC mES
ENSMUST00000029061 N/A 4.616±2.05
ENSMUST00000075044 0.009±0.00 12.485±1.05

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007I5 CIL_0007I5_0002 CGP
CIL_0001H1 CIL_0001H1_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0000792 IDA heterochromatin
GO:0001701 IMP in utero embryonic development
GO:0001833 IMP inner cell mass cell proliferation
GO:0001843 IGI neural tube closure
GO:0003281 IGI ventricular septum development
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IC transcription factor complex
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007507 IMP heart development
GO:0009888 IMP tissue development
GO:0019827 IMP stem cell maintenance
GO:0021915 IGI neural tube development
GO:0030326 IGI embryonic limb morphogenesis
GO:0043234 IDA protein complex
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044485 sall4 protein_coding Danio_rerio
ENSG00000101115 SALL4 spalt-like transcription factor 4 protein_coding Homo_sapiens

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