ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: calcium channel, voltage-dependent, L type, alpha 1F subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000102001 CACNA1F 9606 - X:49205063-49233371 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000323022 CACNA1F-001 49205063-49233371 protein_coding
  ENST00000376251 CACNA1F-002 49205063-49233309 protein_coding
  ENST00000376265 CACNA1F-007 49205063-49233371 protein_coding
  ENST00000480889 CACNA1F-006 49222258-49223143 processed_transcript
  ENST00000481035 CACNA1F-004 49209661-49210999 retained_intron
  ENST00000486943 CACNA1F-005 49208816-49209712 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000323022ENST00000376251ENST00000480889ENST00000481035ENST00000486943
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000323022 N/A 0.011±0.00 N/A N/A N/A
ENST00000376251 0.146±0.00 0.014±0.00 0.011±0.00 N/A 0.006±0.00
ENST00000480889 N/A N/A 0.158±0.00 N/A N/A
ENST00000481035 N/A N/A N/A 0.252±0.00 N/A
ENST00000486943 N/A 0.093±0.02 0.093±0.00 0.256±0.00 0.053±0.03

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001750 IEA photoreceptor outer segment
GO:0005216 IEA ion channel activity
GO:0005245 IDA voltage-gated calcium channel activity
GO:0005891 IDA voltage-gated calcium channel complex
GO:0006811 IEA ion transport
GO:0006874 IEA cellular calcium ion homeostasis
GO:0007409 IEA axonogenesis
GO:0007601 IMP visual perception
GO:0008331 IBA high voltage-gated calcium channel activity
GO:0016020 IEA membrane
GO:0016021 IDA integral component of membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043025 IEA neuronal cell body
GO:0043204 IEA perikaryon
GO:0046872 IEA metal ion binding
GO:0048813 IEA dendrite morphogenesis
GO:0050908 IMP detection of light stimulus involved in visual perception
GO:0055085 IEA transmembrane transport
GO:0060041 IEA retina development in camera-type eye
GO:0070509 IBA calcium ion import
GO:0070588 IEA calcium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010933 cacna1fa protein_coding Danio_rerio
ENSDARG00000023683 cacna1fb protein_coding Danio_rerio
ENSMUSG00000031142 Cacna1f protein_coding Mus_musculus

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