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ANGIOGENES

ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: RNA binding motif (RNP1, RRM) protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000102317 RBM3 9606 + X:48574449-48579066 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000354480 RBM3-004 48575899-48578291 protein_coding
  ENST00000376755 RBM3-005 48574952-48577868 protein_coding
  ENST00000376759 RBM3-003 48574524-48579066 protein_coding
  ENST00000466764 RBM3-009 48574491-48577977 processed_transcript
  ENST00000472897 RBM3-002 48574449-48576591 processed_transcript
  ENST00000485213 RBM3-007 48574536-48576353 processed_transcript
  ENST00000488216 RBM3-008 48574484-48576419 processed_transcript
  ENST00000489344 RBM3-001 48574524-48577735 processed_transcript
  ENST00000490127 RBM3-011 48574511-48576520 processed_transcript
  ENST00000491236 RBM3-010 48574990-48575995 processed_transcript
  ENST00000491240 RBM3-006 48574524-48576068 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000354480ENST00000376755ENST00000376759ENST00000466764ENST00000472897ENST00000485213ENST00000489344ENST00000491240
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000354480 16.799±0.00 N/A 58.999±0.00 N/A 12.314±8.85
ENST00000376755 N/A 44.485±16.02 N/A 99.569±0.00 25.535±25.12
ENST00000376759 36.307±3.63 77.911±31.45 53.045±0.00 80.582±0.00 67.183±59.43
ENST00000466764 N/A 66.348±23.68 N/A N/A 7.297±1.16
ENST00000472897 N/A 131.226±31.83 N/A N/A 516.572±240.40
ENST00000485213 N/A N/A N/A N/A 24.495±1.97
ENST00000489344 N/A 208.187±88.32 N/A 130.301±0.00 92.127±11.51
ENST00000491240 N/A N/A N/A N/A 3.110±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 TAS RNA binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006396 TAS RNA processing
GO:0006412 IEA translation
GO:0006417 ISS regulation of translation
GO:0009409 IEA response to cold
GO:0015934 ISS large ribosomal subunit
GO:0030425 ISS dendrite
GO:0035196 IEA production of miRNAs involved in gene silencing by miRNA
GO:0043023 IEA ribosomal large subunit binding
GO:0044822 IDA poly(A) RNA binding
GO:0045727 ISS positive regulation of translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013351 cirbpb protein_coding Danio_rerio
ENSMUSG00000031167 Rbm3 protein_coding Mus_musculus

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