ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: TBC1 domain family, member 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000104946 TBC1D17 9606 + 19:49877425-49888749 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000221543 TBC1D17-001 49877425-49888744 protein_coding
  ENST00000535102 TBC1D17-003 49877666-49888743 protein_coding
  ENST00000594984 TBC1D17-006 49882266-49888707 nonsense_mediated_decay
  ENST00000594996 TBC1D17-002 49877702-49883002 nonsense_mediated_decay
  ENST00000596243 TBC1D17-004 49878550-49888748 retained_intron
  ENST00000598789 TBC1D17-009 49878076-49881464 processed_transcript
  ENST00000599049 TBC1D17-005 49878187-49885534 protein_coding
  ENST00000600354 TBC1D17-007 49886551-49888743 retained_intron
  ENST00000622860 TBC1D17-201 49877425-49888749 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHUVECENST00000221543ENST00000535102ENST00000594984ENST00000596243
Transcript ID BECs HAoEC HHSEC HUVEC
ENST00000221543 N/A 6.743±3.13 N/A 14.498±10.00
ENST00000535102 N/A 11.984±1.79 10.649±0.00 12.865±3.76
ENST00000594984 49.111±6.00 N/A 23.441±0.00 N/A
ENST00000596243 N/A 5.200±2.51 7.695±0.00 2.874±2.56

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0006914 IEA autophagy
GO:0015031 IEA protein transport
GO:0031410 IEA cytoplasmic vesicle
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0042147 IMP retrograde transport, endosome to Golgi

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005927 tbc1d17 protein_coding Danio_rerio
ENSMUSG00000038520 Tbc1d17 protein_coding Mus_musculus

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