ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038520 Tbc1d17 10090 - 7:44840901-44849079 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047085 Tbc1d17-002 44841025-44849075 protein_coding
  ENSMUST00000130081 Tbc1d17-004 44841033-44848890 retained_intron
  ENSMUST00000133846 Tbc1d17-006 44848275-44848594 retained_intron
  ENSMUST00000139947 Tbc1d17-003 44840901-44848911 retained_intron
  ENSMUST00000142098 Tbc1d17-005 44848026-44848895 retained_intron
  ENSMUST00000145959 Tbc1d17-001 44841032-44849079 nonsense_mediated_decay
  ENSMUST00000149921 Tbc1d17-008 44843380-44844324 retained_intron
  ENSMUST00000153161 Tbc1d17-007 44844577-44846000 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000047085ENSMUST00000139947
Transcript ID C166 Tie2+ EC mES
ENSMUST00000047085 14.922±0.76 9.208±7.81 6.964±0.31
ENSMUST00000139947 N/A 2.957±0.19 12.709±2.84

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0006LB CIL_0006LB_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005097 IEA Rab GTPase activator activity
GO:0005515 IEA protein binding
GO:0005829 IEA cytosol
GO:0006914 IEA autophagy
GO:0015031 IEA protein transport
GO:0031410 IEA cytoplasmic vesicle
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0042147 IEA retrograde transport, endosome to Golgi

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005927 tbc1d17 protein_coding Danio_rerio
ENSG00000104946 TBC1D17 TBC1 domain family, member 17 protein_coding Homo_sapiens

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