ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: troponin T type 1 (skeletal, slow)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105048 TNNT1 9606 - 19:55132794-55149354 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000291901 TNNT1-003 55132794-55149206 protein_coding
  ENST00000356783 TNNT1-001 55132794-55149206 protein_coding
  ENST00000536926 TNNT1-201 55132832-55149206 protein_coding
  ENST00000585321 TNNT1-011 55132865-55146942 protein_coding
  ENST00000586282 TNNT1-006 55145400-55149206 retained_intron
  ENST00000586649 TNNT1-018 55132950-55137177 protein_coding
  ENST00000587089 TNNT1-014 55132876-55146454 nonsense_mediated_decay
  ENST00000587465 TNNT1-012 55132835-55146949 protein_coding
  ENST00000587758 TNNT1-005 55132794-55149193 protein_coding
  ENST00000588147 TNNT1-004 55138018-55149206 protein_coding
  ENST00000588426 TNNT1-007 55132794-55149206 protein_coding
  ENST00000588981 TNNT1-002 55132794-55149354 protein_coding
  ENST00000589226 TNNT1-010 55137976-55147308 protein_coding
  ENST00000589745 TNNT1-016 55132828-55140922 protein_coding
  ENST00000592920 TNNT1-008 55138005-55149206 processed_transcript
  ENST00000593046 TNNT1-009 55137103-55147346 protein_coding
  ENST00000593194 TNNT1-015 55132826-55141891 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000536926ENST00000585321ENST00000586649ENST00000587089ENST00000587465ENST00000588147ENST00000588426ENST00000589745ENST00000592920ENST00000593046ENST00000593194
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000536926 N/A N/A N/A N/A 0.313±0.00
ENST00000585321 0.456±0.08 3.833±2.02 N/A 2.708±0.00 0.567±0.55
ENST00000586649 0.803±0.00 N/A 0.725±0.00 N/A N/A
ENST00000587089 N/A N/A N/A N/A 0.180±0.01
ENST00000587465 N/A 3.878±1.76 N/A N/A 0.370±0.30
ENST00000588147 N/A 0.127±0.00 N/A N/A 0.162±0.05
ENST00000588426 N/A 0.242±0.00 N/A N/A 0.122±0.10
ENST00000589745 1.334±0.61 8.146±3.32 0.475±0.00 N/A 0.613±0.50
ENST00000592920 N/A 0.410±0.00 N/A N/A N/A
ENST00000593046 N/A N/A N/A N/A 0.161±0.16
ENST00000593194 0.921±0.55 3.298±3.23 N/A N/A 0.892±0.60

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003RJ CIL_0003RJ_0001 CGP
CIL_00065K CIL_00065K_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003009 IMP skeletal muscle contraction
GO:0005523 IMP tropomyosin binding
GO:0005829 TAS cytosol
GO:0005861 IEA:IMP troponin complex
GO:0006937 IEA regulation of muscle contraction
GO:0030049 TAS muscle filament sliding
GO:0031014 IEA troponin T binding
GO:0031444 IEA slow-twitch skeletal muscle fiber contraction
GO:0045932 IDA negative regulation of muscle contraction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037954 tnnt1 protein_coding Danio_rerio
ENSMUSG00000064179 Tnnt1 protein_coding Mus_musculus

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