ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000064179 Tnnt1 10090 - 7:4504570-4516382 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071798 Tnnt1-001 4504570-4515975 protein_coding
  ENSMUST00000086502 Tnnt1-012 4504786-4508025 processed_transcript
  ENSMUST00000108587 Tnnt1-002 4504570-4516004 protein_coding
  ENSMUST00000163538 Tnnt1-010 4508578-4514574 protein_coding
  ENSMUST00000163560 Tnnt1-009 4513829-4515107 protein_coding
  ENSMUST00000163710 Tnnt1-003 4504663-4515959 protein_coding
  ENSMUST00000163722 Tnnt1-005 4509610-4516382 protein_coding
  ENSMUST00000166161 Tnnt1-004 4504755-4514368 protein_coding
  ENSMUST00000166268 Tnnt1-011 4507568-4515961 protein_coding
  ENSMUST00000166959 Tnnt1-006 4508510-4514615 protein_coding
  ENSMUST00000168111 Tnnt1-007 4504784-4509938 retained_intron
  ENSMUST00000169571 Tnnt1-008 4507600-4509798 retained_intron
  ENSMUST00000178163 Tnnt1-201 4504663-4515975 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000071798ENSMUST00000086502ENSMUST00000108587ENSMUST00000163538ENSMUST00000163710ENSMUST00000166161ENSMUST00000166268ENSMUST00000166959ENSMUST00000168111ENSMUST00000169571
Transcript ID C166 Tie2+ EC mES
ENSMUST00000071798 0.376±0.00 N/A 2.486±0.00
ENSMUST00000086502 N/A 0.245±0.00 N/A
ENSMUST00000108587 0.304±0.00 N/A N/A
ENSMUST00000163538 0.498±0.01 N/A N/A
ENSMUST00000163710 0.618±0.14 0.669±0.32 1.135±0.00
ENSMUST00000166161 0.724±0.10 0.708±0.00 N/A
ENSMUST00000166268 0.443±0.00 N/A N/A
ENSMUST00000166959 0.518±0.00 N/A N/A
ENSMUST00000168111 N/A 0.255±0.00 0.603±0.00
ENSMUST00000169571 N/A 0.467±0.09 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003RJ CIL_0003RJ_0002 CGP
CIL_00065K CIL_00065K_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003009 IEA skeletal muscle contraction
GO:0005523 IEA tropomyosin binding
GO:0005861 IEA troponin complex
GO:0006937 IEA regulation of muscle contraction
GO:0031014 IEA troponin T binding
GO:0031444 IEA slow-twitch skeletal muscle fiber contraction
GO:0045932 IEA negative regulation of muscle contraction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037954 tnnt1 protein_coding Danio_rerio
ENSG00000105048 TNNT1 troponin T type 1 (skeletal, slow) protein_coding Homo_sapiens

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