ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: erythroid differentiation regulatory factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000107938 EDRF1 9606 + 10:125719515-125764143 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000337623 EDRF1-001 125719703-125764139 protein_coding
  ENST00000356792 EDRF1-007 125719576-125763651 protein_coding
  ENST00000368812 EDRF1-004 125749297-125764143 retained_intron
  ENST00000368813 EDRF1-002 125735887-125741665 protein_coding
  ENST00000368815 EDRF1-008 125719576-125763651 nonsense_mediated_decay
  ENST00000419769 EDRF1-006 125719515-125763579 nonsense_mediated_decay
  ENST00000469725 EDRF1-005 125746701-125749441 retained_intron
  ENST00000481600 EDRF1-003 125719515-125764143 nonsense_mediated_decay
  ENST00000525091 EDRF1-009 125719702-125749096 retained_intron
  ENST00000525358 EDRF1-013 125753779-125763582 nonsense_mediated_decay
  ENST00000525524 EDRF1-011 125747953-125749813 retained_intron
  ENST00000527655 EDRF1-012 125749273-125763706 retained_intron
  ENST00000530795 EDRF1-010 125725766-125735749 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000337623ENST00000356792ENST00000368812ENST00000368813ENST00000368815ENST00000419769ENST00000525091
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000337623 0.255±0.00 2.056±0.89 N/A 2.806±0.00 1.679±0.93
ENST00000356792 N/A 1.179±0.75 N/A N/A 1.285±0.78
ENST00000368812 3.935±2.00 2.656±0.90 21.011±0.00 N/A 2.923±2.94
ENST00000368813 N/A N/A N/A N/A 3.172±0.00
ENST00000368815 N/A 0.788±0.00 N/A N/A 0.649±0.00
ENST00000419769 N/A N/A N/A N/A 0.835±0.00
ENST00000525091 N/A 1.668±0.41 N/A 1.572±0.00 1.444±1.19

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002JW CIL_0002JW_0002 CGP
CIL_0001V7 CIL_0001V7_0001 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019834 edrf1 protein_coding Danio_rerio
ENSMUSG00000039990 Edrf1 protein_coding Mus_musculus

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