ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039990 Edrf1 10090 + 7:133637543-133672971 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000051169 Edrf1-001 133637543-133672971 protein_coding
  ENSMUST00000128901 Edrf1-003 133637693-133672179 protein_coding
  ENSMUST00000137338 Edrf1-005 133667206-133671470 retained_intron
  ENSMUST00000138370 Edrf1-002 133657105-133661881 nonsense_mediated_decay
  ENSMUST00000154795 Edrf1-004 133637861-133639349 retained_intron
  ENSMUST00000176661 Edrf1-006 133665926-133671929 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000051169ENSMUST00000128901
Transcript ID C166 Tie2+ EC mES
ENSMUST00000051169 1.113±0.17 0.780±0.47 0.816±0.47
ENSMUST00000128901 3.266±0.22 2.206±0.20 0.855±0.42

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002JW CIL_0002JW_0003 CGP
CIL_0001V7 CIL_0001V7_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019834 edrf1 protein_coding Danio_rerio
ENSG00000107938 EDRF1 erythroid differentiation regulatory factor 1 protein_coding Homo_sapiens

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