ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: RUN domain containing 3A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000108309 RUNDC3A 9606 + 17:44308413-44318671 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000225441 RUNDC3A-002 44308596-44317870 protein_coding
  ENST00000426726 RUNDC3A-001 44308559-44318671 protein_coding
  ENST00000587483 RUNDC3A-004 44310704-44318669 retained_intron
  ENST00000588564 RUNDC3A-007 44316555-44318670 retained_intron
  ENST00000590834 RUNDC3A-003 44308413-44318670 retained_intron
  ENST00000590941 RUNDC3A-005 44308583-44317726 protein_coding
  ENST00000593079 RUNDC3A-006 44314758-44315713 retained_intron
  ENST00000612735 RUNDC3A-201 44308833-44316740 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000225441ENST00000426726ENST00000587483ENST00000588564ENST00000590834ENST00000590941ENST00000593079ENST00000612735
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000225441 N/A 2.395±0.54 N/A N/A 0.124±0.05
ENST00000426726 N/A N/A N/A N/A 0.085±0.01
ENST00000587483 0.344±0.00 0.039±0.00 0.254±0.00 0.118±0.00 0.032±0.02
ENST00000588564 0.526±0.00 4.087±0.52 N/A N/A 0.120±0.08
ENST00000590834 N/A 0.032±0.00 N/A N/A 0.045±0.01
ENST00000590941 N/A 0.617±0.72 N/A N/A 0.110±0.02
ENST00000593079 N/A N/A N/A N/A 0.175±0.10
ENST00000612735 N/A 3.091±0.88 N/A N/A 0.062±0.03

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0009B6 CIL_0009B6_0001 VISTA
CIL_0007ST CIL_0007ST_0001 VISTA
CIL_0005JA CIL_0005JA_0001 CGP
CIL_0005J9 CIL_0005J9_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005083 TAS small GTPase regulator activity
GO:0005829 IEA cytosol
GO:0005886 IEA plasma membrane
GO:0007264 TAS small GTPase mediated signal transduction
GO:0030250 IEA guanylate cyclase activator activity
GO:0030828 IEA positive regulation of cGMP biosynthetic process
GO:0031284 IEA positive regulation of guanylate cyclase activity
GO:0051428 IEA peptide hormone receptor binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002546 rundc3ab protein_coding Danio_rerio
ENSDARG00000007245 rundc3aa protein_coding Danio_rerio
ENSMUSG00000006575 Rundc3a protein_coding Mus_musculus

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