ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006575 Rundc3a 10090 + 11:102393403-102402555 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000006750 Rundc3a-001 102393403-102402555 protein_coding
  ENSMUST00000107102 Rundc3a-004 102393403-102401754 protein_coding
  ENSMUST00000107103 Rundc3a-005 102393403-102401754 protein_coding
  ENSMUST00000107105 Rundc3a-003 102393403-102401754 protein_coding
  ENSMUST00000128331 Rundc3a-006 102398119-102399779 processed_transcript
  ENSMUST00000131219 Rundc3a-009 102399756-102402152 processed_transcript
  ENSMUST00000132876 Rundc3a-010 102399858-102400785 processed_transcript
  ENSMUST00000142157 Rundc3a-007 102399564-102402226 processed_transcript
  ENSMUST00000146330 Rundc3a-002 102397864-102402555 retained_intron
  ENSMUST00000150982 Rundc3a-008 102399167-102402229 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000006750ENSMUST00000107103ENSMUST00000142157ENSMUST00000146330
Transcript ID C166 Tie2+ EC mES
ENSMUST00000006750 0.387±0.22 1.275±0.82 0.332±0.10
ENSMUST00000107103 N/A N/A 0.245±0.00
ENSMUST00000142157 0.512±0.00 N/A N/A
ENSMUST00000146330 0.653±0.23 0.135±0.00 0.469±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0009B6 CIL_0009B6_0002 VISTA
CIL_0007ST CIL_0007ST_0002 VISTA
CIL_0005JA CIL_0005JA_0002 CGP
CIL_0005J9 CIL_0005J9_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005829 IEA cytosol
GO:0005886 IEA plasma membrane
GO:0030250 IEA guanylate cyclase activator activity
GO:0030828 IEA positive regulation of cGMP biosynthetic process
GO:0031284 IEA positive regulation of guanylate cyclase activity
GO:0051428 IEA peptide hormone receptor binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002546 rundc3ab protein_coding Danio_rerio
ENSDARG00000007245 rundc3aa protein_coding Danio_rerio
ENSG00000108309 RUNDC3A RUN domain containing 3A protein_coding Homo_sapiens

Loading